2005

  • Chatre L, Brandizzi F, Hocquellet A, Hawes C, Moreau P (2005) Sec22 and Memb11 are v-SNAREs of the anterograde endoplasmic reticulum-Golgi pathway in tobacco leaf epidermal cells. Plant Physiol 139: 1244-1254 Abstract

  • Chen H, Wilkerson CG, Kuchar JA, Phinney BS, Howe GA (2005) Jasmonate-inducible plant enzymes degrade essential amino acids in the herbivore midgut. Proc Natl Acad Sci USA 102:19237-19242 Abstract

  • Chen J, Hsu W, Lee ML, Ng SK. Assessing reliability of protein interaction data from high-throughput experiments with belief inference (Poster), 3rd Asia-Pacific Bioinformatics Conference (APBC2005), Singapore, Jan. 2005.

  • Chen J, Hsu W, Lee ML, Ng SK. Discovering reliable protein interactions from high-throughput experimental data using network topology, Artificial Intelligence in Medicine, Special Issue on Computational Intelligence Techniques in Bioinformatics, Vol. 35, Issue 1-2, pp. 37-47, 2005.

  • daSilva LL, Taylor JP, Hadlington JL, Hanton SL, Snowden CJ, Fox SJ, Foresti O, Brandizzi F, Denecke J (2005) Receptor salvage from the prevacuolar compartment is essential for efficient vacuolar protein targeting. Plant Cell 17, 132-148. Faculty of 1000 Biology: http://www.f1000biology.com/article/id/1001784/evaluation -Ian Moore Abstract

  • Fan J, Quan S, Orth T, Awai C, Chory J, Hu J (2005) The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development. Plant Physiol 139: 231-239  Full Text

  • Fan Q, Huang G, Lechno-Yossef S, Wolk CP, Kaneko T, Tabata S (2005) Clustered genes required for synthesis and deposition of envelope glycolipids in Anabaena sp. strain PCC 7120. Mol Microbiol 58: 227-243 (Heterocyst envelope glycolipid biosynthetic pathway predicted) PDF

  • Fowler S, Cook D, Thomashow MF (2005) The CBF cold response pathway. In "Plant Abiotic Stress," M.A. Jenks and P.M. Hasegawa (eds.), Blackwell Publishing, Oxford, pp. 71-99.

  • Fowler SG, Cook D, Thomashow MF (2005) Low temperature induction of Arabidopsis CBF1-3 is gated by the circadian clock. Plant Physiol 137: 961-968 Abstract

  • Fridman E, Wang J, Iijima Y, Froehlich JE, Gang DR, Ohlrogge J, Pickersky E (2005) Metabolic, Genomic and Biochemical Analysis of Grandular Trichomes from the Wild Tomato Species Lycopersicon  Cell 17:1252-1267.

  • Hanton SL, Bortolotti LE, Renna L, Stefano G, Brandizzi F (2005) Crossing the divide—transport between the endoplasmic reticulum and Golgi apparatus in plants. Traf­fic 6: 267-277 Abstract

  • Hanton SL, Renna L, Bortolotti LE, Chatre L, Stefano G, Brandizzi F (2005a) Diacidic motifs influence the export of transmembrane proteins from the endoplasmic reticulum in plant cells. Plant Cell 17, 3081-3093. Faculty of 1000 Biology: Mike Blatt Abstract

  • Koo AJ, Fulda M, Browse J, Ohlrogge JB (2005) Identification of a plastid acyl-acyl carrier protein synthetase in Arabidopsis and its role in the activation and elongation of exogenous fatty acids. Plant J 44: 620-632.

  • Lee YH, Kolade OO, Nomura K, Arvidson, DN, He SY (2005) Use of dominant-negative HrpA mutants to dissect Hrp pilus assembly and type III secretion in Pseudomonas syringae pv. tomato. J Biol Chem 280:21409-21417 Abstract

  • Li C, Schilmiller AL, Liu G, Lee GI, Jayanty S, Sageman C, Vrebalov J, Giovannoni JJ, Yagi K, Kobayashi Y, Howe GA (2005) Role of b-oxidation in jasmonate biosynthesis and systemic wound signaling in tomato. Plant Cell 17: 971-986 Abstract

  • Nomura K, He SY (2005) Powerful screens for bacterial virulence proteins. Proc Natl Acad Sci USA 102:3527-3528 Paper

  • Nomura K, Melotto M, He SY (2005) Suppression of host defense in compatible plant-Pseudomonas syringae interactions. Curr Opin Plant Biol 8(4):361-368 Abstract

  • Noyan-Ashraf MH, Brandizzi F, Juurlink BH (2005) Constitutive nuclear localization of activated caspase 3 in subpopulations of the astroglial family of cells. Glia 49: 588-593

  • Ponder MA,  Gilmour SJ,  Bergholz PW,  Mindock CA,  Hollingsworth R,  Thomashow MF, Tiedje JM (2005) Characterization of potential stress responses in ancient Siberian permafrost psychroactive bacteria. FEMS Microb Ecol 53:103-115.

  • Renna L, Hanton, SL, Stefano G, Bortolotti L, Misra V, Brandizzi F (2005) Identification and characterization of AtCASP, a plant transmembrane Golgi matrix protein. Plant Mol Biol 58: 109-122 Abstract and references

  • Rutherford S, Brandizzi F, Townley H, Craft J, Wang Y, Jepson I, Martinez A, Moore I (2005) Improved transcriptional activators and their use in mis-expression traps in Arabidopsis. Plant J 43: 769-788 Abstract

  • Schilmiller AL, Howe GA (2005) Systemic signaling in the wound response. Curr Opin Plant Biol 8: 369-377 Abstract

  • Skinner JS,  von Zitzewitz J, Marquez-Cedillo L,  Filichkin T,  Szcs P,  Amundsen K, Stockinger EJ,  Thomashow MF,   Chen THH, Hayes PM (2005) Barley contains a large CBF gene family associated with quantitative cold tolerance traits. In: T.H.H Chen, M. Uemura, and S. Fujikawa, (eds.), Cold Hardiness in Plants: Molecular Genetics, Cell Biology and Physiology. CAB International, Oxon, UK, pp. 30-52.

  • Skinner JS, von Zitzewitz J, Szucs P, Marquez-Cedillo L, Filichkin T, Amundsen K, Stockinger EJ, Thomashow MF, Chen TH, Hayes PM (2005) Structural, functional, and phylogenetic characterization of a large CBF gene family in barley. Plant Mol Biol 59:533-51.

  • Vogel JT,  Cook D,  Fowler SG,  Thomashow MF (2005) The CBF cold response pathways of Arabidopsis and tomato. In: T.H.H Chen, M. Uemura, and S. Fujikawa, (eds.), Cold Hardiness in Plants: Molecular Genetics, Cell Biology and Physiology. CAB International, Oxon, UK, pp. 11-29.

  • Vogel JT, Zarka DG, Van Buskirk HA, Fowler SG, Thomashow MF (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis.  Plant J 41: 195-211 Abstract

  • Wang Z, Triezenberg SJ, Thomashow MF, Stockinger EJ (2005) Multiple hydrophobic motifs in Arabidopsis CBF1 COOH-terminus provide functional redundancy in trans-activation. Plant Mol Biol 58:543-59.

  • Xu C, Fan J, Froehlich JE, Awai K, Benning C (2005) Mutation of the TGD1 chloroplast envelope protein affects phosphatidate metabolism in Arabidopsis. Plant Cell 17: 3094-3110 Abstract