2009

  • Adhkari ND, Orler R, Chory J , Froehlich JE , Larkin RM  (2009) Porphyrins stabilize the association of genome uncoupled 4 and a Mg-chelatase subunit with chloroplast membranes. J Biol Chem 284:24783-24796.

  • Aung K, Hu J (2009) The Arabidopsis peroxisome division mutant pdd2 is defective in the DYNAMIN-RELATED PROTEIN3A (DRP3A) gene. Plant Signal Behav 4(6): 542-544 Abstract

  • Bakermans C, Sloup RE, Zarka DG, Tiedje JM, Thomashow MF (2009) Development and use of genetic system to identify genes required for efficient low-temperature growth of Psychrobacter arcticus 273-4. Extremophiles 13:21-30.

  • Beckers GJM, Jaskiewicz M, Liu Y, Underwood W, He SY, Zhang S,  Conrath U (2009) Mitogen-activated protein kinases 3 and 6 are required for full priming of stress responses in Arabidopsis thaliana. Plant Cell 21: 944-953 Abstract

  • Boller T,  He SY (2009) Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens. Science 324: 742-744 Abstract

  • Bordowitz JR, Whitaker MJ, Montgomery BL (2009) Independence and interdependence of the photoregulation of pigmentation and development in Fremyella diplosiphon. Comm Integr Biol 3(2): 151-153 Abstract

  • Brach T, Soyk S, Hinz G, Hell R, Brandizzi F, Meyer AJ (2009) Fusion of transmembrane proteins with redox-sensitive GFP enables non-invasive analysis of protein topology in vivo. Plant J. 57: 534-541

  • Büttner D,  He SY (2009) Type III secretion in plant pathogenic bacteria. Plant Physiol 150: 1656-1664 Full Update

  • Cape JL, Aidasani D, Kramer DM, Bowman MK (2009) Substrate redox potential controls superoxide production kinetics in the cytochrome bc complex. Biochemistry 48: 10716-10723 Abstract

  • Chatre L, Matheson LA, Jack AS, Hanton SL, Brandizzi F (2009) Efficient mitochondrial targeting relies on cooperation of multiple protein signals in plants. J. Exp. Bot. 60: 741-749 [Comment in Logan DC (2009) Known knowns, known unknowns, unknown unknowns and the propagation of scientific enquiry. J Exp Bot. 60:741-749] Abstract

  • Chatre L, Wattelet-Boyer V, Melser S, Maneta-Peyret L, Brandizzi F, Moreau P. (2009) A novel di-acidic motif facilitates ER export of the syntaxin SYP31. J. Exp. Bot. 60: 3157-3165

  • Chen J, Ji LP, Hsu W, Tan KL, Rhee S. Exploiting domain knowledge to improve biological significance of bi-clusters with key missing genes, proceedings of 25rd IEEE Intl Conf Data Engineering (ICDE 2009), pp. 1219-1222, Shanghai, China, Mar. 2009.

  • Chung HS, Howe GA (2009) A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis. Plant Cell 21: 131-145 Abstract

  • Chung HS, Niu Y, Browse J, Howe GA (2009) Top hits in contemporary JAZ: An update on jasmonate signaling. Phytochemistry 70: 1547-1559 Full Text

  • Doherty CJ, Van Buskirk HA, Myers S, Thomashow MF (2009) Roles of Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance.  Plant Cell 21: 972-984 (subject of commentary: NA Eckardt, Plant Cell 21:697) Abstract

  • Faso C, Boulaflous A, Brandizzi F (2009) The plant Golgi apparatus: Last 10 years of answered and open questions. FEBS Lett 583: 3752-3757 Abstract

  • Faso C, Chen Y, Tamura K, Held MA, Zemelis S, Marti L, Saravanan R, Hummel E, Kung L, Miller EA, Hawes C, Brandizzi F (2009) A missense mutation in the Arabidopsis COPII coat protein Sec24A induces the formation of clusters of the endoplasmic reticulum and Golgi apparatus. Plant Cell 21: 3655-3671 Abstract

  • Gao J, Ajjawi I, Manoli III A, Sawin A, Xu C, Froehlich JE, Last RL, Benning C (2009) FATTY ACID DESATURASE 4 of Arabidopsis encodes a protein distinct from classic fatty acid desaturases. Plant J 60:832-839 Abstract

  • Ham JH, Majerczak DR, Nomura K, Mecey K, Uribe F, He SY, Mackey D,  Coplin DL (2009) Multiple activities of the plant pathogen type III effector proteins WtsE and AvrE require WxxxE motifs. Mol Plant-Microbe Interact 22: 703-712 Abstract

  • Hambourger M, Moore GF, Kramer DM, Gust D, Moore AL, Moore TA (2009) Biology and technology for photochemical fuel production. Chem Soc Rev 38(1): 25-35 Abstract

  • Hanton SL, Matheson LA, Chatre L, Brandizzi F (2009) Dynamic organization of COPII coat proteins at endoplasmic reticulum export sites in plant cells. Plant J 57: 963-974 Abstract

  • Hark AT, Vlachonasios KE, Pavangadkar KA, Rao S, Gordon H, Adamakis ID, Kaldis A, Thomashow MF, Triezenberg SJ (2009) Two Arabidopsis orthologs of the transcriptional coactivator ADA2 have distinct biological functions. Biochim Biophys Acta 1789: 117-124.

  • Kaur N, Hu J (2009) Dynamics of peroxisome abundance: a tale of division and proliferation.  Curr Opin Plant Biol 12: 781-788 Full Text

  • Kaur N, Reumann S,  Hu J (2009) Peroxisome biogenesis and function. In CR Somerville, EM Meyerowitz, eds, The Arabidopsis Book. American Society of Plant Biologists, Rockville, MD (doi: 10.1199/tab.0123)

  • Koo AJ, Gao X, Jones AD, Howe GA (2009) A rapid wound signal activates systemic synthesis of bioactive jasmonates in Arabidopsis. Plant J 59: 974-986.

  • Koo AJK, Gao X, Jones AD, Howe GA (2009) A rapid wound signal activates systemic synthesis of bioactive jasmonates in Arabidopsis. Plant J 59: 974-986 Abstract

  • Koo AJK, Howe GA (2009) The wound hormone jasmonate. Phytochemistry 70: 1571-1580 Abstract

  • Li Z, Ahn TK, Avenson TJ, Ballottari M, Cruz JA, Kramer DM, Bassi R, Fleming GR, Keasling JD, Niyogi KK (2009) Lutein accumulation in the absence of zeaxanthin restores nonphotochemical quenching in the Arabidopsis thaliana npq1 mutant. Plant Cell 21(6): 1798-1812 Abstract

  • Luo H, Hallen-Adams HE, Walton JD (2009) Processing of the phalloidin proprotein by prolyl oligopeptidase from the mushroom Conocybe albipes. J Biol Chem 284: 18070-18077 Abstract

  • Mikkelsen MD, Thomashow MF (2009) A role for circadian evening elements in cold-regulated gene expression in Arabidopsis.  Plant J 60: 328-339 Abstract

  • Montgomery BL (2009) Spatial-specific phytochrome responses during de-etiolation in Arabidopsis thaliana. Plant Signal Behav 4(1): 47-49 Abstract

  • Nagendran S, Hallen-Adams H, Paper JM, Aslam N, Walton JD (2009) Reduced genomic potential for secreted plant cell-wall-degrading enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei. Fung Genet Biol 46: 427-435 Abstract

  • Reumann S, Quan S, Aung K, Yang P, Manandhar-Shrestha K, Holbrook D, Linka N, Switzenberg R, Wilkerson CG, Weber APM Olsen LJ, Hu J (2009) In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Plant Physiol 150: 125-143 Abstract

  • Saravanan RS, Slabaugh E, Singh VR, Lapidus LJ, Haas T, Brandizzi F (2009) The targeting of the oxysterol-binding protein ORP3a to the endoplasmic reticulum relies on the plant VAP33 homolog PVA12. Plant J 58: 817-830 Abstract

  • Schoepp-Cothenet B, Lieutaud C, Baymann F, Verméglio A, Friedrich T, Kramer DM, Nitschke W (2009) Menaquinone as pool quinone in a purple bacterium. Proc Natl Acad Sci U S A 106(21): 8549-8554 Abstract

  • Speth E, Imboden, L, Hauck P, He SY (2009) Subcellular localization and functional analysis of the Arabidopsis GTPase RabE. Plant Physiol 149: 1824-1837 Abstract

  • Speth E, Melotto M, Zhang W, Assmann SM, He SY (2009) Crosstalk in pathogen and hormonal regulation of guard cell signaling. In K Yoshioka, K Shinozaki, eds, Signal Crosstalk in Plant Stress Responses.  Wiley-Blackwell, Ames, IA, pp. 96-112

  • Warnasooriya SN, Montgomery BL (2009) Detection of spatial-specific phytochrome responses using targeted expression of biliverdin reductase in Arabidopsis thaliana. Plant Physiol 149: 424-433 Abstract

  • Whitaker MJ, Bordowitz JR, Montgomery BL (2009) CpcF-dependent regulation of pigmentation and development in Fremyella diplosiphon. Biochem Biophys Res Commun 389: 602-606 Full Text

  • Wight W, Kim K-H, Lawrence CB, Walton JD (2009) Biosynthesis and role in virulence of the histone deacetylase inhibitor depudecin from Alternaria brassicicola. Mol Plant-Microbe Interact 22: 1258-1267 Abstract

  • Zhang R, Cruz JA, Kramer DM, Magallanes-Lundback ME, Dellapenna D, Sharkey TD (2009) Moderate heat stress reduces the pH component of the transthylakoid proton motive force in light-adapted, intact tobacco leaves. Plant Cell Environ 32(11): 1538-1547 Abstract

  • Zhang X, Hu J (2009) Two small protein families, DYNAMIN-RELATED PROTEIN 3 and FISSION 1, are required for peroxisome fission in Arabidopsis. Plant J 57: 146-159 Abstract

  • Zou C, Lehti-Shiu MD, Thomashow M, Shiu SH (2009) Evolution of stress-regulated gene expression in duplicate genes of Arabidopsis thaliana.  PLOS Genet 5: e1000581 Full Text