2010

  • Adhikari N, Buck SM, Froehlich JE, Larkin RM (2010) GENOMES UNCOUPLED 4 contributes to porphyrin channeling and photooxidative stress tolerance in Arabidopsis thaliana. Plant Cell, in press

  • Agapakis C, Ducat D, Boyle P, Wintermute E, Way J, Silver P (2010). Insulation of a synthetic hydrogen metabolism circuit in bacteria.  J. Biol. Engin. Feb 25.  

  • Aung K, Zhang X, and Hu J (2010). Peroxisome division and proliferation in plants. Biochem Soc Trans 38: 817-822 Abstract

  • Ayala-del-Río HL, Chain PS, Grzymski JJ, Ponder MA, Ivanova N, Bergholz PW, Di Bartolo G, Hauser L, Land M, Bakermans C, Rodrigues D, Klappenbach J, Zarka D,  Larimer F, Richardson P, Murray A, Thomashow M, Tiedje JM (2010) The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth. Appl Environ Micobiol 76: 2304-2312.

  • Banerjee G, Car S, Scott-Craig JS, Borrusch MS, Aslam N, Walton JD (2010) Synthetic enzyme mixtures for biomass deconstruction: production and optimization of a core set. Biotechnol Bioeng 106: 707-720 Abstract

  • Banerjee G, Car S, Scott-Craig JS, Borrusch MS, Bongers M, Walton JD (2010) Synthetic multi-component enzyme mixtuers for deconstruction of lignocellulosic biomass. Bioresour Technol, in press Abstract

  • Bordowitz JR, Montgomery BL (2010) Exploiting the autofluorescent properties of photosynthetic pigments for analysis of pigmentation and morphology in live Fremyella diplosiphon cells. Sensors 10(7): 6969-6979 Abstract

  • Brandizzi F (2010) Is there a COPII-mediated membrane traffic in chloroplasts? Traffic 12: 9-11

  • Brutus A, He SY (2010) Pattern recognition receptors: going practical. Nature Biotech 28: 330-331 Full text

  • Canella D, Gilmour SJ, Kuhn LA, Thomashow MF (2010) DNA binding by the Arabidopsis CBF1 transcription factor required the PKKP/RAGRxKFxETRHP signature sequence. Biochim Biophys Acta 1799: 454-462 Abstract

  • Chung HS, Cooke TF, DePew CL, Patel C, Ogawa N, Kobayashi Y, Howe GA (2010) Alternative splicing expands the repertoire of dominant JAZ repressors of jasmonate signaling. Plant J 4: 613-622 Abstract

  • Davis J, Brandizzi F, Liepman A, Keegstra K (2010) Arabidopsis mannan synthase CSLA9 and glucan synthase CSLC4 have opposite orientations in the Golgi membrane. Plant J., 64: 1028-1037

  • Day B, He SY (2010) Battling immune kinases in plants. Cell Host Microbe 7(4): 259-261. Summary Comment on: Cell Host Microbe 7(4): 290-301

  • Howe GA (2010) Ubiquitin Ligase-Coupled Receptors Extend Their Reach to Jasmonate. Plant Physiol 154(2):471-474 Abstract

  • Hu J (2010) Molecular basis of peroxisome division and proliferation in plants. In KW Jeon, ed, International Review of Cell and Molecular Biology, Vol. 279, Burlington: Academic Press, pp 79-99

  • Kang JH, Shi F, Jones AD, Marks D, Howe GA (2010) Distortion of trichome morphology by the hairless mutation of tomato affects leaf surface chemistry. J Exp Bot 61: 1053-1064 Abstract

  • Kiirats O, Kramer DM, Edwards GE (2010) Co-regulation of dark and light reactions in three biochemical subtypes of C3 species.Photosynth Res [Epub ahead of print, PMID: 20549356] Abstract

  • Kramer DM (2010) The photonic ‘smart grid’ of the chloroplast in action. Proc Natl Acad Sci USA 107: 2729-2730 Extract

  • Lalonde S, Sero A, Pratelli R, Pilot G, Chen J, Sardi M, Parsa S, Kim DY, Acharya B, Stein E, Hu HC, Villiers F, Takeda K, Yang Y, Han Y, Schwacke R, Chiang W, Kato N, Loqué D, Assmann S, Kwak J, Schroeder J, Rhee S, Frommer W. A membrane protein / signaling protein interaction network for Arabidopsis version AMPv2. Frontiers Plant Physiol, Vol.1 Num 24, pp. 1-14, 2010.

  • Livingston AK, Cruz JA, Kohzuma K, Dhingra A, Kramer DM (2010) An Arabidopsis mutant with high cyclic electron flow around photosystem I (hcef) involving the NADPH dehydrogenase complex. Plant Cell 22(1): 221-233 Abstract

  • Livingston AK, Kanazawa A, Cruz JA, Kramer DM (2010) Regulation of cyclic electron flow in C(3) plants: differential effects of limiting photosynthesis at ribulose-1,5-bisphosphate carboxylase/oxygenase and glyceraldehyde-3-phosphate dehydrogenase. Plant Cell Environ [Epub ahead of print,PMID: 20545877] Abstract

  • Marti L, Fornanciari S, Stefano G, Renna L, Brandizzi F (2010b) COPII-mediated traffic in plants. Trends Plant Sci 15: 522-528            

  • Marti L, Stefano G, Tamura K, Hawes C, Renna L, Held MA, Brandizzi F (2010) A missense mutation in the vacuolar protein GOLD36 causes organizational defects in the ER and aberrant protein trafficking in the plant secretory pathway. Plant J (doi: 10.1111/j.1365-313X.2010.04296.x) Abstract

  • Montgomery BL, Pattanaik B (2010) Photoregulation of nutritional responses in Fremyella diplosiphon: Effects of light quality on organismal responses to iron availability. Environ Res J, in press

  • Pattanaik B, Montgomery BL (2010) A novel role for a TonB-family protein and photoregulation of iron acclimation in Fremyella diplosiphon. Plant Signal Behav 5(7): 851-853 Abstract

  • Pattanaik B, Montgomery BL (2010) FdTonB is involved in the photoregulation of cellular morphology during complementary chromatic adaptation in Fremyella diplosiphon. Microbiology 156: 731-741 Abstract

  • Pavangadkar K, Thomashow MF, Triezenberg SJ (2010) Histone dynamics and roles of histone acetyltransferases during cold-induced gene regulation in Arabidopsis. Plant Mol Biol 74: 183-200 Abstract

  • Quan S, Switzenberg R, Reumann S,  Hu J (2010) In vivo subcellular targeting analysis validates a novel peroxisome targeting signal type 2 and the peroxisomal localization of two proteins with putative functions in defense in Arabidopsis. Plant Signal Behav 5(2): 151-153 Abstract

  • Reyes F, León G, Donoso M, Brandizzi F, Weber A, Orellana A (2010) The nucleotide sugar transporters AtUTr1 and AtUTr3 are required for the incorporation of UDP-glucose into the endoplasmic reticulum and are essential for pollen development and needed for embryo sac progress in Arabidopsis thaliana. Plant J., 61: 423-435

  • Rosa BA, Oh S, Montgomery BL, Chen J, Qin W (2010) Computing gene expression data with a knowledge-based gene clustering approach. Int J Biochem Mol Biol 1(1): 51-68

  • Rosa, B.A., Oh, S., Montgomery, B.L., Chen, J*., Qin, W*. Computing gene expression data with a knowledge-based gene clustering approach. International Journal of Biochemistry and Molecular Biology 1(1):51-68. 2010 (*co-corresponding author).

  • Sheard LB, Tan X, Mao H, Withers J, Ben-Nissan G, Hinds TR, Kobayashi Y, Hsu FF, Sharon M, Browse J, He SY, Rizo J, Howe GA, Zheng N (2010) Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature 468: 400-405 Abstract

  • Sheard LB, Tan X, Mao H, Withers J, Ben-Nissan G, Hinds TR, Kobayashi Y, Hsu FF, Sharon M, Browse J, He SY, Rizo J, Howe GA, Zheng N (2010) Jasmonate perception by inositol-phosphate-potentiated COl1-JAZ co-receptor. Nature. 2010 Nov 18;468(7322):400-5. Epub 2010 Oct 6 Abstract

  • Stefano G, Renna L, Rossi M, Azzarello E, Pollastri S, Brandizzi F, Baluska F, Mancuso S (2010) AGD5 is a GTPase-activating protein at the trans-Golgi network. Plant J., 64: 790-799

  • Thomashow MF (2010) Molecular basis of plant cold acclimation: insights gained from studying the CBF cold response pathway. Plant Physiol 154: 571-577.

  • Warnasooriya SN, Montgomery BL (2010) Investigating tissue- and organ-specific phytochrome responses using FACS-assisted cell-type specific expression profiling in Arabidopsis thaliana. J Vis Exp 39, in press Abstract

  • Wolk CP, Lechno-Yossef S, Jäger KM (2010) The insertion sequences of Anabaena sp. strain PCC 7120 and their effect on its orfs. J Bacteriol  192: 5289-5303 (Might mutation by insertion sequences account for the lack of certain phenotypes in the Anabaena strain widely used?) PDF

  • Zeng W, He SY (2010) A prominent role of the flagellin receptor FLAGELLIN-SENSING2 in mediating stomatal response to Pseudomonas syringae pv. tomato DC3000 in Arabidopsis. Plant Physiol 153(3): 1188-1198 Abstract

  • Zeng W, Melotto M, He SY (2010) Plant stomata: a checkpoint of host immunity and pathogen virulence. Curr Opin Biotechnol 21: 599-603 Abstract

  • Zhang X,  Hu J (2010) The Arabidopsis chloroplast division protein DYNAMIN-RELATED PROTEIN5B also mediates peroxisome division. Plant Cell 22: 431-442 Abstract